BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C05SP1|AL429360
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1549 0.0
3x_Contig1624 191 2e-48
3x_Contig1263 177 3e-44
3x_Contig869 173 5e-43
3x_Contig1722 171 2e-42
>3x_Contig1503
Length = 10719
Score = 1549 bits (770), Expect = 0.0
Identities = 834/867 (96%), Gaps = 1/867 (0%)
Strand = Plus / Plus
Query: 1 gatccaccctatgtttctatattgtgncaacaagctccgtagacacttacggagaaacta 60
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3170 gatccaccctatgttgctatattgtgtcaacaagctccgtagacacttacggagaaacta 3229
Query: 61 tacaagtaaattacacactcaaagaaagccatctgtgtctatcgcacaaatatatatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3230 tacaagtaaattacacactcaaagaaagccatctgtgtctatcgcacaaatatatatcag 3289
Query: 121 ctttgccataaaaaccacatwtatgcatctgccatgatatggatagtacttgtggtcgat 180
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3290 ctttgccatataaaccacatatatgcatctgccatgatatggatagtacttgtggtcgat 3349
Query: 181 catactgcttagggaaaagacataattbtcccgtttcgtggaaaggctggttttgcagcc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3350 catactgcttagggaaaagacataattttcccgtttcgtggaaaggctggttttgcagcc 3409
Query: 241 gataccgtccacagtgaaggctgtgtgtgtggcctttctttctttccctttgtggcatag 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3410 gataccgtccacagtgaaggctgtgtgtgtggcctttctttctttctctttgtggcatag 3469
Query: 301 aagattcaaaaaaaaaaamaagtcccccgggggcgagtcgaacgcccgacccccagatta 360
|||||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||
Sbjct: 3470 aagattcaaaaaaaaaaataagtctcccgggggcgagtcgaacgcccgatctccagatta 3529
Query: 361 caaatbgcyttgtgttttcaaawhacagtctggcgccttaaaccaacytggctaccgaga 420
||||| || ||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 3530 caaattgctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgaga 3589
Query: 421 ggagttacttggcttttggcatacyacggagagtcacattaggaagtacaagtcgcatgg 480
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 3590 ggagttacttggcttttggcatactacggagagttacattaggaagtacaagtcgcatgg 3649
Query: 481 ggaagamagaattaggaaaaggtagaatgcmatgcaatgcaatgcaatcaagcggtggga 540
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3650 ggaagaaagaattaggaaaaggtagaatgcaatgcaatgcaatgcaatcaagcggtggga 3709
Query: 541 aacyacgaacagcyagtaccgttcgatggtatcgcaggtgtctanaccgacagtcgnngc 600
||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| | ||
Sbjct: 3710 aactacgaacagctagtaccgttcgatggtatcgcaggtgtctataccgacagttgttgc 3769
Query: 601 gngamamacactgtctttctggacagamattcatacaaggcccgtgaatagctaaatatt 660
| || | ||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3770 gtgaaaaacactgtttttctggacagaaattcatacaaggcccgtgaatagctaaatatt 3829
Query: 661 aagttagttagtatgtggatccaacgcaaatkgcctcatatkgcatgaggcagaattcta 720
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 3830 aagttagttagtatgtggatccaacgcaaatggcctcatatggcatgaggcagaattcta 3889
Query: 721 tgaagtgaagagcacttgacaccatagtcaggtttgatatcttcatcttcatcttcgtct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3890 tgaagtgaagagcacttgacaccatagtcaggtttgatatcttcatcttcatcttcgtct 3949
Query: 781 tctctctctacatatatgtacatgtatttgtatatcatctcttattcaacttttgagg-a 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3950 tctctctctacatatatgtacatgtatttgtatatcatctcttattcaacttttgaggaa 4009
Query: 840 aatactgaaaaatttaaaccaatgaaa 866
|||||||||||||||||||||||||||
Sbjct: 4010 aatactgaaaaatttaaaccaatgaaa 4036
>3x_Contig1624
Length = 12551
Score = 191 bits (95), Expect = 2e-48
Identities = 110/119 (92%)
Strand = Plus / Plus
Query: 313 aaaaaamaagtcccccgggggcgagtcgaacgcccgacccccagattacaaatbgcyttg 372
|||||| ||||| |||||||||||||||||||||||| | ||||||||||||| || |||
Sbjct: 5984 aaaaaaaaagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgctttg 6043
Query: 373 tgttttcaaawhacagtctggcgccttaaaccaacytggctaccgagaggagttacttg 431
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6044 tgttttcaaattacagtctggcgccttaaaccaacttggctaccgagaggagttacttg 6102
>3x_Contig1263
Length = 6840
Score = 177 bits (88), Expect = 3e-44
Identities = 111/122 (90%)
Strand = Plus / Minus
Query: 310 aaaaaaaaamaagtcccccgggggcgagtcgaacgcccgacccccagattacaaatbgcy 369
||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||| ||
Sbjct: 5589 aaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattgct 5530
Query: 370 ttgtgttttcaaawhacagtctggcgccttaaaccaacytggctaccgagaggagttact 429
||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 5529 ttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagaagttact 5470
Query: 430 tg 431
||
Sbjct: 5469 tg 5468
>3x_Contig869
Length = 2873
Score = 173 bits (86), Expect = 5e-43
Identities = 106/116 (91%)
Strand = Plus / Minus
Query: 308 aaaaaaaaaaamaagtcccccgggggcgagtcgaacgcccgacccccagattacaaatbg 367
||||||||| | ||||| |||||||||||||||||||||||| | ||||||||||||| |
Sbjct: 1976 aaaaaaaaagataagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 1917
Query: 368 cyttgtgttttcaaawhacagtctggcgccttaaaccaacytggctaccgagagga 423
| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1916 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagga 1861
>3x_Contig1722
Length = 17718
Score = 171 bits (85), Expect = 2e-42
Identities = 105/115 (91%)
Strand = Plus / Plus
Query: 308 aaaaaaaaaaamaagtcccccgggggcgagtcgaacgcccgacccccagattacaaatbg 367
||||| ||||| ||||| |||||||||||||||||||||||| | ||||||||||||| |
Sbjct: 5663 aaaaacaaaaagaagtctcccgggggcgagtcgaacgcccgatctccagattacaaattg 5722
Query: 368 cyttgtgttttcaaawhacagtctggcgccttaaaccaacytggctaccgagagg 422
| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 5723 ctttgtgttttcaaattacagtctggcgccttaaaccaacttggctaccgagagg 5777
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,201
Number of Sequences: 1807
Number of extensions: 10201
Number of successful extensions: 331
Number of sequences better than 1.0e-20: 5
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)